1cwlVersion: v1.1
2class: CommandLineTool
3baseCommand: [python, -m, census.do_qc]
4
5inputs:
6 log:
7 type: File
8 default:
9 class: File
10 location: census.log
11 inputBinding:
12 prefix: --log
13 in_pkl:
14 type: File
15 default:
16 class: File
17 location: census.pkl
18 inputBinding:
19 prefix: --in_pkl
20 qc_file:
21 type: File
22 default:
23 class: File
24 location: census_qc.yml
25 inputBinding:
26 prefix: --qc_file
27 qc_log:
28 type: string
29 default: census_qc.log
30 inputBinding:
31 prefix: --qc_log
32
33outputs:
34 qc_log:
35 type: File
36 outputBinding:
37 glob: $(inputs.qc_log)